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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … 10k samples/year, Dr. Louie and her team work with other JGI scientists in development of new, advanced mass …
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User Executive Committee
The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical capabilities offered, …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles … analysis.   Overview of metabolomics products At JGI, in-depth molecular profiles are generated for …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring users … have access to cutting-edge capabilities to help advance their science by generating data in three overarching … with  Science Programs and  Operations enable the JGI to focus on expanding molecular capabilities and …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … and archaeal genomes. By clustering genomes based on their pairwise AF and ANI values, we were able to ascertain … within IMG. While ANI is integrated within IMG, ani.jgi.doe.gov serves the current data. … The mission of the …
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Natural Prodcast
… to medicine, the environment, and human health. As the JGI acts on its goals in — and builds out its capabilities … field about current and future developments, and how the JGI can be part of that space.   …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the … paper was able to resolve the latter question, despite of their well-designed sampling and analysis of their data at …
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the … FY2021 Austrian Academy of Sciences Fellowship (2011-2015) DAAD (“German Academic Exchange Service”) scholarship …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through … for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user facilities—the  … to warming through the whole soil profile. The goals of their FICUS proposal include assessing the distribution of …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory … informed … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities … tools at no cost. The JGI and EMSL are supported by the DOE's Biological and Environmental Research (BER) program.   …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … from the data yet? Are there any specific examples you can share? Avinash: Yes, I will mention two here. The main …
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Gut Fungi: Unexpected Source of Novel Chemicals
… of oxygen, dwell in herbivore guts and help them digest their last leafy meal. In their evolutionary history, these … genomes were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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