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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … energy. As reported January 28, 2019 in Nature Communications , two research teams joined forces and data sets to … by a common ancestor to all five lineages. In the lab of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI …
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Draft Genome Sequence of Monaibacterium marinum C7T, Isolated from Seawater from the Menai Straits, Wales, United Kingdom
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Complete Genome Sequence of the Thermophilic Bacterium Exiguobacterium sp. AT1b
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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … creating new opportunities for breakthrough discoveries and catalyzing a major transition of biology into data science.  … discovery of new genes with important biotechnological applications (e.g., new CRISPR-Cas variants and new CRISPR-Cas …
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PhycoCosm Tutorial
… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative … by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, Alan Kuo, Sara …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … survival of the microorganisms that live there.  A  Communications Biology article highlights how one microalga … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). In their …
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JGI & KBase at PAG XXVII
… your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … for Shattering   In mid-2019, JGI and KBase will be co-located at Berkeley Lab’s Integrative Genomics Building (IGB). Click …
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I-Min (Amy) Chen
… data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol … Model (OPM) data management tools for scientific applications developed at Berkeley Lab. Dr. Chen is currently the Microbiome …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
… to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …
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An Automated Tool for Assessing Virus Data Quality
… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), has developed a …
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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have revisited a … Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — for …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
… on plants and microbes, Trent Northen’s group at Berkeley Lab created a fabricated ecosystem – an EcoFAB. These small plastic growth chambers let researchers …
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