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Supercharging SIP in the Fungal Hyphosphere
HT-SIP is a capability available to request through  the JGI proposal calls . … Work at Lawrence Livermore National …
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Trent Northen
… the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … Sci Data. 11, 339. https://doi.org/10.1038/s41597-024-03069-7  p.eadg7888. DOI: 10.1126/sciadv.adg7888 Treen D, et …
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Waiting to Respire
… of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI collaborator, postdoctoral fellow Paula Matheus … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and research … study, with Matheus Carnevali and Schulz sharing co-first authorship. Their data suggests that the shared common …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial … uncultivated microbes and viruses. Prior to joining the JGI, she was a Bioinformatics Program Fellow at the Gordon … et al. 2016. Uncovering Earth’s virome. Nature 536 , 425-430. Eloe-Fadrosh EA, et al. 2016. Metagenomics uncovers gaps …
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Computationally Classifying Fungal Lifestyles
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in Mycology . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved … as part of the 1000 Fungal Genomes Project supported by the JGI Community Sequencing Project # 662 . …
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Igor Grigoriev
… genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched scale-up of algal … diversity and function.  Nature Microbiol. 7(9):1419-1430. Ye et al (2022) The role of zinc in the adaptive …
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Yasuo Yoshikuni
… has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology … for building composite materials. Before joining the JGI, Dr. Yoshikuni was co-founder and chief science officer … Yoshikuni is the DNA Synthesis Science Program Head at the JGI. Click to learn more about the program's areas of focus, …
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Triggering Morel Fruiting
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … acquired from an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide … for every family of fungi. In the following guest piece, JGI user Dr. Tan details the results of the team’s work. …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory, to create the database. JGI provided metagenome and metatranscriptome sequences, as … Contract Nos. DE-AC02-05CH11231 (JGI) and DE-AC05-76RL01830 (EMSL). …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through … Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for support from 53 received … studies the alga  Chlamydomonas reinhardtii , one of the JGI’s Flagship genomes. She and her colleagues have …
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Making a Lichen Together
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and his team at the JGI contributed to annotation of the genomes, available … from each other. A possible explanation, according to the authors, lies in their finding that each lichen partner can …
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Fishing for Novel Cellulose Degraders
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of potential applications to industrial processes. Summary JGI researchers developed a function-driven, single-cell … Contract No. DE-AC02-05CH11231. The work was supported by a JGI Director’s Science award. The DOE Joint BioEnergy …
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