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… a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way … long it takes a forest to return to pre-burn health. This work brought together researchers from Colorado State …

… hours.   FY 2025 DOE Metrics There were 2,627 unique* JGI users in FY2025 , which includes Principal Investigators … days due to reduced lab activities related to the return-to-work plan in response to the pandemic.   FY 2019 Number of … PDF] Q2 – Report on progress developing new experimental capabilities to analyze complex genomic or metagenomic …

… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine microbial … silent under standard laboratory conditions. Researchers with the Department of Energy (DOE) Joint Genome Institute … studying Streptomyces species or related microbes can work with the JGI to apply the same integrated approach to …

… livestock — specifically, from the methane-making microbes within their rumen. There is another climate-minded reason … down potential biomass sources in ways we are only just beginning to understand. A better understanding of rumen … across nine countries. Learn more about the Hungate1000 work led by AgResearch collaborators Bill Kelly and Sinead …

… the total global methane production. They are thought to use billions of tons of the carbon dioxide trapped in … of them archaea. The Quake lab had previously collaborated with the JGI on a proposal using this approach through the … Technologies Opportunity Program (ETOP). Following that work, they partnered once more with JGI Microbial Program …

… that will help solve energy and environmental challenges. Within days of the Deepwater Horizon oil rig explosion that … between.” To find an explanation, his team tracked the thousands of bacterial and archaeal species using a DNA-based … a new “oil-seeking” species related to Oceanospirillales , work that also involved Janet Jansson’s team. Jansson is …

… challenges. Chlamydomonas is a single-celled alga with a unique place in evolutionary history. Retaining … production in other algae that may be more viable for sustainable biofuel production. The JGI published a partial … early days as a Harvard postdoc. While she had intended to work on cyanobacteria, fate stepped in when a fire at the …

… species to grow better than its closest relative S. paradoxus at high temperatures (39°C/102°F). The Impact One of the … in terms of genetics, metabolism and biochemistry. Their capabilities can be harnessed for a wide range of biotechnological applications, including biofuel production. Efforts such as the 1000 Fungal Genomics Project …

… microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from … University of Maryland School of Medicine and her graduate work in microbial oceanography at Scripps Institution of … Microbiome Data Collaborative (NMDC). Prospective users with questions on how to partner with the Metagenome Science …

… in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important role in the cycling of … The video complements a recently published paper with first author Amundson in the journal Microbiome . The work builds off a proposal approved through a collaborative …

… In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the journal Nature . The mushroom has a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to … perspective, involving more multidisciplinary teams. The work also paved the way for a longstanding collaboration …

… from left: [Above] Hao Chen, Matthew Cope-Arguello, Theophilus Olufemi Isimikalu, Todd H. Oakley, BJ Philmus and Aaron … woody bioenergy crops through transcriptional network mapping, developing microbial systems to convert … program, these projects integrate cutting-edge genomic data with predictive modeling and bioengineering to advance U.S. …