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Metagenomic Sequencing of Two Salton Sea Microbiomes
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JGI Workshops at PAG
… the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, … biology and hear from researchers who are applying genomic sequence information to BER funded activities of plant …
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Nikos Kyrpides
… on Microbiome Data Science. His group is developing novel methods for enabling large-scale comparative analysis, as …
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The Power of One, Amplified
… the value of conducting large-scale single cell genomics by collecting nearly 500 single cells from a single low … snippets of microbial genomes directly from environmental sequence data, by piecing each genome together from large … another might exhibit few limitations to interactions and new connections, thus sharing more ideas, similar to the …
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Taking Stock of the Known and Unknown Microbial Space
… genomic biodiversity. Using publicly available genome sequence data generated over the past three decades, their … of the available datasets. Efforts to recover MAGs by extracting data directly from environmental samples over … Seshadri said. “It’s a reminder of the urgency to cultivate new microbial species.” Targeted Explorations for …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… its way into the groundwater of several communities in New Mexico via leakage from a local dry-cleaner. … Compensation, and Liability Act (CERCLA) was enacted by Congress in 1980 for Superfund sites which are hazardous … and 2010. DNA was extracted from the samples that were sequenced by the U.S. Department of Energy (DOE) Joint …
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10 From JGI on the 2019 Highly Cited Researchers List
… the Methodology section as “those that rank in the top 1% by citations for papers published and cited between … Nature Genetics, the work is part of a long-term project to sequence, annotate and analyze the genomes of more than 300 … for an uncultivated virus genome, including the source, methods of identification of the virus genome, and data …
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JGI Scientists Pen Genome Watch Articles
… are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature Reviews … Institute in the UK — a nonprofit that was founded to help sequence the human genome. Today, the Sanger Institute … hot topics in genomics.” And it makes sense to Woyke why JGI would have this role. “We work with leaders in …
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SpaRC: scalable sequence clustering using Apache Spark
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Improving genome assemblies by sequencing PCR products with PacBio
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Complete Genome Sequence of Francisella philomiragia ATCC 25017
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Revealing the transcriptomic complexity of switchgrass by PacBio long-read sequencing
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