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Statement on the Use of Genomics Data
… field of genomics established in  Bermuda (1996-1997) and reinforced by the  Fort Lauderdale Agreement (2003), the JGI … to uploading sequence data generated on behalf of its user community to NCBI as well as to the  data portals that … at the DOE Office of Biological and Environmental Research program. Following these discussions, the JGI will …
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Charting Progress toward Professional Goals
… on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the next generation of …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Microbiomes (IMG/M) platform — has been developed to help inform scientists and researchers more about the patterns … Office of Science’s Biological and Environmental Research program because it also allows scientists to understand the … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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2024 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, … in April 2024 — through serving an increased number of users with a record output of products, making data easier …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your science. …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory through the Community Science Program . The comparative framework provided by these high … in  Marchantia  and in flowering plant lineages.   With the information about  Marchantia -specific innovations and …
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Effects of Polar Light Cycle on Microbial Food Web
… Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Lab). The work was enabled by the JGI’s Community Science Program. For most months each year, Ace Lake is covered in …
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FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Fishing for Novel Cellulose Degraders
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of potential applications to industrial processes. Summary JGI researchers developed a function-driven, single-cell …
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