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Waiting to Respire
… of life on Earth, and led to the development of multicellular organisms. Not all bacterial lineages harnessed … Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed Margulisbacteria, … Facility, and research scientist Frederik Schulz in Woyke’s Single Cells group had generated and analyzed single …
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First Monoploid Reference Sequence of Sugarcane
… used to define a minimum tiling path of sequences in a single contiguous region. The JGI sequenced half of the … as a reference. The final sugarcane sequence generated is 382 Mb; 25,316 protein-coding gene models were predicted with more than … U.S. Department of Energy under Contract No. DE-AC02-05CH11231. …
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users … Summary Most Streptomyces species can produce roughly 30 secondary metabolites — chemical compounds not required … begins on the genome. This revealed a sweeping cellular response: The bacterium absorbs potassium ions to …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… symbiotic interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … the microorganisms had a close relationship. Then, using metagenomes and metatranscriptomes generated by the U.S. … Area funded by the US Department of Energy (DE-AC02-05CH11231 to J.F.B.). The work ( proposal doi: …
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JGI Hosts GPU Hackathon in May
… “JGI is one of the largest producers of environmental genomics data and has a strong reputation in the community,” …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… to be where we’re going to level off. And that’s in a single lifetime, right? Or maybe two generations. And so, … think like it’s, it’s this unique time where the preceding 300 years, that change was not occurring at that pace, right. And then, hopefully, 3-400 years down the road we’ll have a steady state where we …
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Leo Baumgart
… bacteria, fungi, and plants. His team is also developing single-nuclei sequencing methods to characterize gene regulation at the level of individual cells across diverse plant tissues. Dr. Baumgart focuses on expanding functional genomics capabilities through process automation and method …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… help drive discoveries that will render new economic advantages for farmers concerned with improving sustainable soil … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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A Shrubbier Version of Rubber
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Genome Sequence of Arenibacter algicola Strain TG409, a Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton
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Licence to knockdown — the phage gene silencer
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