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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Rex Malmstrom
… is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … probing metagenomics. mSystems 8:e01280-22. Volland et al. 2022.   A centimeter-long bacterium with DNA contained in …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity of cell types and associated … 10.1016/j.celrep.2023.112676 10.1016/j.devcel.2022.01.008 10.1038/s42003-021-02477-4 … 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The … the discovery of regulatory cascades as well as crosstalk between sigma factors. While characterizing sigma … That work published in Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and …
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Complete genome sequence and the expression pattern of plasmids of the model ethanologen Zymomonas mobilis ZM4 and its xylose-utilizing derivatives 8b and 2032
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Genome sequence of Ensifer meliloti strain WSM1022; a highly effective microsymbiont of the model legume Medicago truncatula A17
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Transcriptomic Data Sets for Zymomonas mobilis 2032 during Fermentation of Ammonia Fiber Expansion (AFEX)-Pretreated Corn Stover and Switchgrass Hydrolysates
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from … their experiences below. Name: Noelle Anderson Class Year: At the time of the internship, 4th year PhD student in …
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace … Group “Everyone here is very kind and really open to talking about their work. It’s fun to be around people who …
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Extracting the Secrets of Secondary Metabolites
… (Clustered Regularly Interspaced Short Palindromic Repeats) is the leading tool for accurately editing genomes, its … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … cluster. That work by JGI researchers was published April 2022 in Cell Chemical Biology . When it comes to insect …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … and cancer genetics. Dr. Blow carried out postdoctoral work at LBNL, where he worked on computational and experimental … Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  Ensifer Species during Free-Living …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … Prior to this, he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the development of numerous genomic resources that fostered the widespread adoption of Brachypodium …
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