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… Bob uses single-cell genomics and metagenomics to explore how microbes influence people and the environment. This includes … studying the diversity, physiology and community ecology of microbes sampled from the natural environment. …

… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role he supervises the Genome Assembly, QA/QC, and … BS in Biochemistry and Biological Chemistry, Nottingham University, UK PhD in Genomics, University of … et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. …

… Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … and analysis of their data at the time. Following the publication of their paper in 2011, Dr. Sekimoto from …

… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced … team conducted a large-scale comparison, charting several changes caused by the lifestyle change. For example, the … The project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …

… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their local … information has allowed the research team to associate climate adaptations with switchgrass biology, information … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… In honor of the JGI's 25th anniversary in 2022, we have … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … a more straightforward way to connect genes and infer changes in gene function across the phylogeny — and link …

… Highlighting the latest interactive version of the JGI’s plant data portal. On … current, and only, version of Phytozome accessible as an interactive website. Since May 2019, v12 has not had any … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their … different elements of the ecosystem interact and respond to changes in the environment. The Impact Dubbed “the” … on the rhizosphere and interactions between the trees, microbes and soil chemistry offers insights into how these …

… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … and impactful analysis of microbiome data that has changed our understanding of the microbiome and the … analysis to better characterize how viruses infect soil microbes and influence how soil ecosystems function. He was …

… have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and … and Peatland Responses Under Climatic and Environmental Change (SPRUCE) project Melanie LeGro (2016 graduate … Clarissa Nobile, investigating interactions between microbes and venomous hosts. She also facilitates the …

… common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural shift … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental samples. The Science A … to first target cells from communities of uncultivated microbes, and then efficiently retrieve and characterize … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …