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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… More than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s … where he will be working on the Spruce and Peatland Responses Under Climatic and Environmental Change (SPRUCE) project Melanie LeGro (2016 …
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JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in … unless otherwise noted): December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating … metabolic profiling in roots reveals plant specific responses to drought at the Biosphere 2 tropical rainforest” …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an … prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with little or no oxygen, life had found other … by the United States Department of Agriculture National Institute of Food and Agriculture grant 2018-67015-27495, …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from … researchers to solve the world’s evolving energy and environmental challenges.   Mission  The mission of the JGI is …
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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… metabolic activities. Found in marine and terrestrial environments, actinobacteria play roles in both the carbon and … provided by the team. These strains have been characterized physiologically and enzymatically, with descriptions of how … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to … that allow the organisms to adapt to and control their environment. Many secondary metabolites are produced by groups … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative … researchers to access capabilities of the JGI and the Environmental Molecular Science Laboratory (EMSL), another DOE … the Department of Energy (DOE) Office of Biological and Environmental Research (BER) and is a contribution of the …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… link in the evolution and transition of fungi from aquatic to terrestrial habitats. The work is part of the JGI’s 1000 … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … of land plants and evolved in early microbial biocrust environments.     …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … of how organisms interact with each other and with their environment and help unravel these complexities  This ecosystem … specifically optimized for high-performance computing environments. …
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