Search

… data set will help identify how different elements of the ecosystem interact and respond to changes in the … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …

Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science … and applied novel computational and experimental sequence-based methods for elucidating the gene regulatory landscape … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, …

Ancient  Chloroflexota s ditched their flagella and other traits when … structures that enable organisms to swim around. However, genome and metagenomic sequencing conducted by the U.S. … don’t have flagella, meaning they were lost in the evolutionary adaptation to marine environments. These …

For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past … mentors TBK Reddy and Dimitri Stamatis, Porting XML/Python Based Quality Control to Database/Java Based Process in Gold … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … over 27,000 microbial genes. These genes were identified based on their potential to efficiently degrade … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …

… to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … called geNomad identifies and classifies MGEs based upon their gene content and their genetic sequences. … Lead Nikos Kyrpides at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …

… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …

Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent of …