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… Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is …

… Control of Drought Response in Sorghum (EPICON) is a five-year, multi-institution project funded by the DOE Office of … impact the crop and its microbiome. For three consecutive years (2016-2018), researchers conducted large-scale … each week over the full life cycle of the plant. The first year’s gene expression results were  published in the  …

… and pangenomic analysis of the genus Streptomyces. Sci Rep. 2022 Nov 7;12(1):18909. Otani H, Mouncey NJ. RIViT-seq … of regulons of transcriptional machineries. Nat Commun. 2022 Jun 17;13(1):3502. Udwary DW, Otani H, Mouncey NJ. New … trove of microbial natural products. Nat Rev Microbiol. 2021 Nov;19(11):683. Mouncey NJ, Otani H, Udwary D, Yoshikuni …

… For the last 15 years, Ray Turner has been one constant for the Joint Genome … Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has been one constant for the Joint Genome … an effort and Ray is that person.” For nearly all of his 15 years of his JGI/Berkeley Lab tenure, Ray kept the …

… distinguish males and females even when plants with multi-year generation times are young and haven’t physically … by the National Natural Science Foundation of China (31590821, 31561123001, 31500502, 41871044), National Key Research …

… the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE … to easily analyze viral genomes. This includes (i) classifying viruses into groups that can be compared across … viral genomes ( Nature Biotechnology , 2021), geNomad , a tool for identifying mobile genetic …

… to analyze samples from one experiment. Starting a  few years ago, researchers can request quantitative SIP analysis … and Reusability) for data reuse.  In the last year, JGI’s user community has helped propel multiple … of his lab, Abigayle Simpson. They found that although 20 years of SIP experiments have generated plenty of insights, …

… approach for isolating individual bacterial cells and amplifying their genetic material, thus bypassing the need to … probing metagenomics. mSystems 8:e01280-22. Volland et al. 2022.   A centimeter-long bacterium with DNA contained in … 2016. Visualizing in situ translational activity for identifying and sorting slow-growing archaeal− bacterial …

… comprehensive learning experience.” Over the course of the year, she and other JGI staff conducted several real-time, … publication in a reputable scientific journal. It was gratifying to see the empowerment displayed across each of their … considers the experience the highlight of her past year’s work at the JGI. As the students look forward to …