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Plasmid Copy Number Engineering Accelerates Fungal Polyketide Discovery upon Unnatural Polyketide Biosynthesis
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Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria
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John Vogel
… diploid nature, self compatibility, rapid generation time and simple growth requirements. Links to experimental … Scarlett, et. al. 2023 Multiple origins, one evolutionary trajectory: gradual evolution characterizes … ISBN: 978-3-319-26942-9 Gordon, et. al. 2014 Genome Diversity in Brachypodium distachyon : Deep Sequencing of …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… aren’t interested in waiting decades to develop new crops. One example is an ongoing collaborative effort to improve … customize the crop for additional end products. The genetic diversity within this set of plants, each with a … ago with a proposal from UT-Austin’s Tom Juenger, a longtime JGI collaborator and a senior author on this study. The …
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JGI@25: From Life at the Extremes to Editing Genomes
… The collaboration has resulted in several papers, including one in 2018 on the discovery of miniature CRISPR-associated … with a conversation from another UC Berkeley colleague, longtime JGI collaborator Jill Banfield. "It was 2006, and I was … scoutRNA Is Required for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: …
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Identification of candidate genes in Arabidopsis and Populus cell wall biosynthesis using text-mining, co-expression network analysis and comparative genomics
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A Standardized Synthetic Eucalyptus Transcription Factor and Promoter Panel for Re-engineering Secondary Cell Wall Regulation in Biomass and Bioenergy Crops
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Laminarin stimulates single cell rates of sulfate reduction whereas oxygen inhibits transcriptomic activity in coastal marine sediment
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Feathermoss and epiphytic Nostoc cooperate differently: expanding the spectrum of plant–cyanobacteria symbiosis
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efam: an expanded, metaproteome-supported HMM profile database of viral protein families.
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Ten Years of Maintaining and Expanding a Microbial Genome and Metagenome Analysis System
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An expanded evaluation of protein function prediction methods shows an improvement in accuracy
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