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JGI Pitches 2022 Visiting Faculty Program Collaborations
… Kellom for the JGI Metagenome Program Ellen Dow and Elisha Wood-Charlson for the DOE Systems Biology Knowledgebase (KBase) Ian Blaby for the JGI DNA Synthesis Platform Ben Bowen and …
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Katherine Louie
… samples in support of user science.  Capabilities offered by the platform are a result of Dr. Louie’s establishment of … metabolite analysis, creation of large metabolite databases by running 1000s of metabolite standards, and development of … micro-organisms within complex communities, and custom software for integrating metabolomics with genomic data …
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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, 2020, a shelter-in-place order for all residents took effect …
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JGI-UC Merced Interns Share Their 2021 Experiences
… Polymorphisms Created by Transposable Elements …
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Six join FICUS program in 2026
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect … sequencing or DAP-seq. The technology was developed by Ronan O’Malley , who leads the Sequencing Technologies … proposal through the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as …
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JGI announces 2024 New Investigator portfolio
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Building on Experience, With a Twist?
… The first time I did this internship in the summer of 2020, it was a time where the world literally stopped. …
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Evolution of a Fungal Gene Expression Regulator
… analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and functions, but the DNA bases … (epigenome).  In  Nature Ecology & Evolution , a team led by Robert Schmitz at the University of Georgia and including …
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Leo Baumgart
… wide range of JGI user science projects spanning bacteria, fungi, and plants. His team is also developing single-nuclei … S., Alexandra M. Linz, Leo A. Baumgart, Yu Zhang, Ian Blaby, Ritesh Mewalal, Vivian Ng, Daniel R. Noguera, and …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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