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A toolkit for microbial community editing
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the crop for additional end products. The genetic diversity within this set of plants, each with a fully-sequenced … sustainable alternative fuels. Common Gardens Are A Community Effort The common gardens began nearly a decade …
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Tracing the Evolution of Shiitake Mushrooms
… sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks the enzymes … Genome and transcriptome sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts in the field of viral …
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Sediment microbial communities in Great Boiling Spring are controlled by temperature and distinct from water communities
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Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub … located at Lawrence Berkeley National Laboratory, have collaborated with global researchers on projects related to understanding …
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Webinar: Introducing the BioSANS capability
Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted a webinar to showcase how … (BioSANS) instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations from: Scott Lea, …   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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A Complex Confection Decoded: Sugarcane Reference Genome
Sugarcane was the last major crop without a reference quality genome and now crop researchers … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … Institute. The work was partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference …
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Phylogenomically Guided Identification of Industrially Relevant GH1 β‑Glucosidases through DNA Synthesis and Nanostructure-Initiator Mass Spectrometry
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Trent Northen
Berkeley Lab in 2008, Dr. Northen has had leadership roles within large DOE-funded research programs using mass … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic … ecosystems (EcoFABs). … Trent Northen is the Metabolomics Science Program Head at the JGI. Click to learn more about …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory … Automated Laboratories: Integrating Experimentation with Data.” The event will take place at the Seattle … and environmental science. They provide the scientific community access to cutting-edge capabilities for …
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