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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel … Because most microbes cannot be cultivated under laboratory conditions, their genomes can’t be sequenced using … microbial diversity and function.” He is already finding ways to utilize the catalog in his own research on how …
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The Case for Conservation
… help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . … the multiple advances in sequencing technologies applied to the effort. The Impact Found on all continents, including … contamination, and drought. The moss genomes’ metabolic pathways could lead to the discovery of genes that could be used …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related to her thesis on cone snails, UC Merced graduate student …
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Help from Citrus’ Bitter, Hardier Cousin
… genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for … only bitter, intensely sour fruit. Yet this plant, native to China and now disseminated around the globe, often as a rootstock for  Citrus , appeals in other ways. It better tolerates cold, withstands pests, and, …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… more about what they learned from working with their JGI mentors, what challenges they overcame, and what new skill sets they look forward to taking back to school.  The interns from this cohort and … to the project and I learned a lot and gonna take a lot away from it.  Ruoxi Zhao : Yeah, the most exciting thing I …
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JGI Announces 2023 Community Science Program Awardees
Congratulations to the proposers of the 19 proposals selected for the 2023 … User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “We’re very excited to start working with this years’ crop of CSP recipients, …
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JGI Early Career Researchers Featured in mSystems Special Issue
… head Emiley Eloe-Fadrosh outline more targeted approaches to reconstruct individual microbes in an environmental … approach uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools before sequencing to … with specific metabolic processes. A third approach steps away from reconstructing genomes directly from the …
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Tina Clarke
Genome Institute (JGI). Tina serves in an HR advisory role to Division/Area management and supervisors to recommend solutions and appropriate actions on diverse HR … in Counseling from John F. Kennedy University. As a Mediator she is committed to enabling conflict resolution with …
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Clarence Le
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) hosted a pitch event promoting … for current faculty. Applying faculty members may invite up to two student participants from the faculty member’s home … JGI Metabolomics Platform Blake Simmons for The BioManufactory Completed VFP applications are due on January 12, 2022. …
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Honey Bee Gut Microbiota Divvy Up Dinner
… bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing … bacterial enzymes. Honey bees rely on their gut microbiota to produce these enzymes to break down polysaccharides. But …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared their … with 86 participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic … rather than single cells or isolated strains, is easy to generate, but difficult to assemble and interpret. The …
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