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Len Pennacchio
Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to … DNA Synthesis, and Metabolomics) as well as Research & Development in all of these areas. Additional duties of this … in Genome Biology & Technology (AGBT)” … Education … About the Deputy of Genomic Technologies … Selected …
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Kjiersten Fagnan
Research Division.. As a postdoc, her research focused on stable and accurate computational methods for … of the Networking and Information Technology Research and Development (NITRD) Program Chair of the Bike East Bay Board … 2018 NERSC, CRD Petascale Postdoctoral Fellow … Education … About the JGI Chief Informatics Officer … Selected …
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JGI@25: Building a Better Bean
… may not seem to amount to much, the common bean (Phaseolus vulgaris) is actually a vital source of protein in many … of which are particularly important for child growth and development, as well as a vital economic player, as a cash … trait. Traditionally beans have had a shelf-life about roughly 6-9 months before their color begins to …
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it … ocean could fix less carbon when infected. Little is known about virus-infected microbial cells that are transformed … outcomes of these infections can affect the interactions within their ecosystems. Summary Microbes drive the energy …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… from plants, microorganisms, and environmental samples using targeted and untargeted approaches. The webinar … and Ben Bowen of the  JGI Metabolomics Program , along with Jenny Mortimer, Director of Plant Systems Biology at … with metabolomics analysis.  Q: Can you give us an idea about the scale of an average study? How many samples are …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter scenes that came with crayons in various shades of white. To researchers … with billions of sequences, and soon, with trillions. The development of efficient, automated approaches to analyze …
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Gene Expression: From On-Off Switch to Dial
… approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of … of essential genes in metabolic networks that were missed using traditional approaches. This novel form of … the realm of bioenergy optimization. Summary Life is all about balance. This study,  recently published in the  …
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Access to Rock Star Scientists
… so nice and helpful.”     Mo Kaze, UC Merced JGI Mentor : Susannah Tringe, Microbial Systems Group “Everyone here is very kind and really open to talking about their work. It’s fun to be around people who are generous with their time and like nerding out about the big stuff, …
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Game On: High School Students Drive Everglades Metagenomics Study
Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the … the next generation of scientists. She shares her thoughts about the experience below. In the summer of 2018, Jonathan … The course had a defined set of objectives, and started with an image of a spoonful of dirt with the question: Do …
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Annual Genomics of Energy & Environment Meeting
Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual … synthesis, metabolomics, data analysis, and new technology developments – that the JGI offers through proposal calls on …
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Gotta Catch 'Em Gall
… called galls.  In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these weird little pods. …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… expands the global diversity of large and giant viruses. While the microbes in a single drop of water could … of 100 times the size of what has typically been associated with viruses, while the genomes of large viruses may be only … they are found everywhere, comparatively little is known about viruses, much less those considered large and giant. …
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