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Pan genome of the phytoplankton Emiliania underpins its global distribution
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How genomics can help unravel the evolution of endophytic fungi
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JGI@25: From Life at the Extremes to Editing Genomes
… led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection … ecosystems around the world, conducting iterative searches using statistical analyses to continuously refine and … and Management.” So begins a passage from Doudna’s book about her meeting with Banfield. (Banfield’s recounting of …
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DAP-seq Drives Robust Mapping of Gene Regulation
… deciphering the complex wiring behind a city’s power grid. Just as the flow of electricity controls when and where … from grasses to broccoli and trees like poplar, spanning about 150 million years of evolution,” said Leo Baumgart, … challenges by using  in vitro -expressed TFs and fragmented genomic DNA, eliminating the need for living cells. This …
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Charting Progress toward Professional Goals
… they gain invaluable scientific and technical experiences.  Genomic data scientist Deanna Beatty sat down with interns … programs – some managed by the Lab – to learn more about their experiences. Jehan Jacobs participated in the … it? Jehan Jacobs : I have a poster session actually, like just a couple days from now. So I've been thinking about …
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JGIota: The Algae Nicknamed ‘Chlamy’
… This shorter episode is about a tiny, single-celled alga – Chlamydomonas reinhardtii … managed to sequence its genome, and what it has to teach us about other organisms – like plants. [ Editor’s Note: … Merchant is also a faculty scientist in the Environmental Genomics & Systems Biology Division of the Berkeley Lab …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… down potential biomass sources in ways we are only just beginning to understand. A better understanding of rumen … around the world, encompassing 54 researchers from 14 organizations across nine countries. Learn more about the Hungate1000 work led by AgResearch collaborators …
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An Integrated Dataset to Understand Ecosystem Interaction
… time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well as the soil surrounding … wildlife habitats and water-quality regulation. Focusing on the rhizosphere and interactions between the trees, … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … Biology .  Watch this webinar hosted by EMSL to learn more about BioSANS. Letters of Intent are due March 17, 2021 for … also welcome to apply to the FICUS program. Find out more about the FICUS program at:  jgi.doe.gov/user-programs . Q:  …
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Microbial Genomics & Metagenomics (MGM) Workshop
… (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes … wealth of public microbiome sequence data and enables the user to analyze these data with existing bioinformatic …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… to right are: [Above] Sara Branco, Asdrubal Burgos, Posy Busby, Hao Chen, Jay Chen, Maureen Coleman and Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang … This portfolio accelerates bioenergy innovation through genomic discovery across diverse organisms and ecosystems. …
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JGI User Executive Committee Expands
… Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department of … genetics expertise and experience as a primarily fungal genomics user, he aims to help align JGI policies with … JGI offers, as well as proposal review procedures and the organization of the JGI Annual Meeting. Any investigator who …
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