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COVID-19 pandemic reveals the peril of ignoring metadata standards
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Four Researchers Join JGI User Executive Committee
… Four researchers have been elected to the User Executive Committee of the Joint Genome Institute, a … Life symposia. Bik is a recipient of the Community Science Program (CSP) New Investigator call. Through membership in … UEC also contributes to proposal review procedures and the organization of the JGI Annual Meeting. Any investigator who …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… established and emerging scientists from academia, industry, and government organizations for three days of scientific presentation, … center talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your …
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DOE JGI Interns Share Their Summer Experiences
… part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, among the interns were two … groups, respectively. Each of the interns spoke briefly about their time at the JGI at … Merced Genomics Distinguished Graduate Internship Program, Susannah Tringe and Axel Visel hosted Imelda …
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Cultivating Symbiotic Antarctic Microbes
… ecological consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental … researchers have been able to gain further insights about how microbes have adapted to thrive in polar … Aenigmarchaeota, Nanoarchaeota, and Nanohaloarchaea) superphylum of extremophilic archaea first outlined by JGI …
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” … and pathogenicity, in turn affecting the microbe’s own eukaryote host. As their small genomes can be easily … inovirus has established itself through a process called superinfection exclusion, which is another way by which they …
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JGI@25: Using Team Science to Build Communities Around Data
… The 1KFG project represents affiliations at over 180 organizations in 29 U.S. states and 35 countries. (Graphic: … Genomes (1KFG) Project through a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State … Spatafora and Jason Stajich from UC Riverside would focus on broad sampling of early diverging fungi, and Francis …
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JGIota: The Algae Nicknamed ‘Chlamy’
… This shorter episode is about a tiny, single-celled alga – Chlamydomonas reinhardtii … managed to sequence its genome, and what it has to teach us about other organisms – like plants. [ Editor’s Note: …
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JGI-UC Merced Interns Share Their 2021 Experiences
… working virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and … for their PhD research. And for the first time in this program’s history, two interns returned to re-engage with … foster a diverse future workforce in science. To learn more about each intern’s experience during their internship, …
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A Model System for Perennial Grasses
… model to study drought tolerance in perennial grasses using Panicum hallii (Hall’s panicgrass), by generating two … The U.S. Department of Energy (DOE) supports research programs for developing methods for converting plant biomass into sustainable fuels for cars and jets. By studying a close …
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Computationally Classifying Fungal Lifestyles
… and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  Dothideomycetes could … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes excel … funded by the Biological and Environmental Research (BER) program, together with understanding enabled by Basic Energy … contexts.  “That allows us now to really start thinking about the structure-function relationship. What could we do, …
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