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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science …
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Taking Stock of the Known and Unknown Microbial Space
… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial … collection and on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) database. In their analysis, the team …
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JGI on the 2020 Highly Cited Researchers List
… those recognized by Clarivate Analytics as “true pioneers in their fields over the last decade, demonstrated by the production of multiple highly-cited papers that rank in the top 1% by citations for field and year in the Web of … available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Nikos Kyrpides and  Simon Roux …
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A Community Resource for Secondary Metabolite Researchers
Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most living creatures for energy, growth and reproduction—most … portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. That portal …
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages … Nayfach et al. (2021) A genomic catalog of Earth’s microbiomes. Nature Biotechnology 39, 499-509. Schulz et al. …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … The proposal targets the CSP focus area in plant microbiomes, as well as those in inter-organismal … bacteria with symbiotic relationships in plant roots of legume crops such as soybeans and peas. Their …
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Graduate Students Get Thesis Research Opportunity at the JGI
Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab at … a remarkable opportunity to launch a pilot project and begin the work of understanding how engineered environments … and the interactions of plants with their associated microbiomes. Tringe was also Kaze’s mentor during her 2018 …
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JGI on the 2021 Highly Cited Researchers List
… among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen field or fields through the … featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved … State University and colleagues aim to understand how soil microbiomes in fire-adapted ecosystems respond to low and …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter scenes that came … datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then looked into many more …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place … researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome …
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