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You Can Move, But You Can’t Hide
… mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic entities … currently has more than 700,000 plasmids from genomes, metagenomes and metatranscriptomes. To lower barriers to … Science User Facilities operated under Contract No. DE-AC02-05CH11231. This work also received support from the …
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A One-Stop Shop for Analyzing Algal Genomes
… to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one … Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of … Office of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. S.C., B.K., and I.V.G. were supported in part …
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Training the Next Generation of Talent
… of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus … Systems Biology (QSB) Group under the School of Natural Sciences (SNS). During his eight weeks at the DOE JGI, … Eddy Rubin. “QSB faculty are active DOE JGI Community Science Program collaborators, and UC Merced has many …
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Boosting Small Molecule Production in Super “Soup”
… to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by Hal … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … than were noted inside the cell. “One of the huge advantages of the cell-free system is that the cells are no …
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Computationally Classifying Fungal Lifestyles
… on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, …
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Pinning Down a Piece of Photosynthesis
… often hiding their function from even the most determined scientist.  Recent work in  Nature Communications takes on … the first author of this paper. Grosjean is a research scientist at the U.S. Department of Energy (DOE) Joint … and longtime JGI collaborator Sabeeha Merchant’s group. In 2011, they inventoried a swath of blueprints to find parts …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M … enriching workshops and networked with fellow interns and scientists alike. Want to learn more about their experience? … A&M University this fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute … a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley Laboratory, and Adjunct … a vision for future technical JGI directions for DOE User science. … Complete Publications Genomic Technologies …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency … type of food that was in the contaminated aquifer in 2007 to achieve this goal. In less than four years, parts of … Science Program , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets … by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … do so, they compared samples collected from an aquifer in 2012 and 2018 against a biofilm sample collected in 2018. …
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Tanja Woyke Elected to American Academy of Microbiology
… (AAM) ! She is among the 68 new Fellows in the Class of 2020, selected from 118 nominees. The selection process for AAM Fellows is based on their records of scientific achievement and original contributions that have … and insight on critical issues in microbiology.  A senior scientist at Lawrence Berkeley National Laboratory (Berkeley …
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A Grass Model to Help Improve Giant Miscanthus
… insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for … team. The work was a joint effort led by scientists at the Center for Advanced Bioenergy and … and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. Department of Energy …
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