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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately identify mobile … at Lawrence Berkeley National Laboratory (Berkeley Lab), with computing resources provided by NERSC, another user … datasets, geNomad is poised to become an essential tool for researching global viral diversity. geNomad has already been …
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Annual Genomics of Energy & Environment Meeting
… you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The … disciplines to highlight how they are addressing the world’s most pressing energy and environmental challenges.  … The invited talks emphasize how the research infrastructure – DNA sequencing, synthesis, metabolomics, data …
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First Monoploid Reference Sequence of Sugarcane
… species, sequencing programs generally focus on a genotype with two identical sets of chromosomes to produce a … – sorghum. The Impact Sugarcane produces 80 percent of the world’s sugar, which is of interest to bioenergy researchers … that can be used to assemble a more complex and more realistic polyploid sugarcane genome now underway as part of …
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A Mentor’s Perspective on Training the Next Generation
… Over the years, hundreds of interns have come to the JGI from all parts of the globe to … they’ve all mentioned how invaluable their time at the JGI was and how great it was to have an experienced career …
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Phototrophic Co-cultures From Extreme Environments: Community Structure and Potential Value for Fundamental and Applied Research
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … “It’s a unique capability; no one else can do it in the world at this scale.” A bottleneck in the DAP-seq protocol, … workflow that reduces the time and cost associated with this purification step, and Baumgart continued and …
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A Sorghum Pangenome Opens More Doors to Discovery
… harness the traits that let this biomass powerhouse thrive. Within its genome, Sorghum bicolor holds keys to drought and … possible for this plant. In other lines around the world, much more genetic diversity exists.  Now, researchers … Biotechnology Genome Sequencing Center and a member of the JGI Plant Program. Lovell was a senior author on this work …
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Pinning Down a Piece of Photosynthesis
… pin down.  Photosynthesis appears to have a lot in common with a Rube Goldberg machine: surprising dependencies, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … region —  a domain of unknown function, DUF2470. In the world of proteins, a domain of unknown function is a bit of …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… included in the next review. “So webinars like this didn’t really fully exist back then,” said Hal Alper, a University … Zerbe of the University of California, Davis. “The work with JGI was one of the first things we actually started … proposal involving six labs at universities around the world was the first of the Functional Genomics call’s …
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ATGC: a database of orthologous genes from closely related prokaryotic genomes and a research platform for microevolution of prokaryotes
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Six join FICUS program in 2026
… The JGI is excited to welcome six to the Facilities Integrating … (FICUS) program for fiscal year 2026, in partnership with the Environmental Molecular Sciences Laboratory (EMSL) … these projects include biofuels, biomaterials and bioproducts; hydrobiogeochemistry; interorganismal interactions; …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the crop for additional end products. The genetic diversity within this set of plants, each with a fully-sequenced … at other field sites. “This paper is a combination of really cutting-edge genomics and genetic analysis with large …
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