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Pinning Down a Piece of Photosynthesis
… and cyanobacteria create the air we breathe and the fuel for food webs as they turn carbon dioxide and water into … of metallic protein that no one’s ever had a structure of before,” said Crysten Blaby-Haas, a research scientist at the … has some amazing resources and people — not just the instrumentation — but the experts we were able to work with on …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm … to include: A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome , using … Biotechnology paper on the release of the high quality reference genome sequence of green millet ( Setaria viridis …
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Understanding Wildfire Recovery, Starting in Soil
The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees to grow. However, fire changes …
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Digging into Microbial Ecosystems Deep Underground
… -Mike Wilkins, Colorado State University GI users and microbiome researchers Mike Wilkins and his graduate student … about the microbial communities deep underground, and before the pandemic, they took the JGI on a sampling field … initiative called Facilities Integrating Collaborations for User Science (FICUS) . Through FICUS, the researchers …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that there is … and metatranscriptome sequences, as well as individual reference fungal genome sequences assembled as part of its …
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Complete Genome of the Cellulolytic Ruminal Bacterium Ruminococcus albus 7
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How Microbes Can Protect Plants in Drier Straits
A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was … approved through the JGI Community Science Program, to use microbiome science to help make plants more resilient to …
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Evolution of a Fungal Gene Expression Regulator
… ways to protect poplar and other crops being considered for bioenergy feedstock development. Summary With the aim of producing at least one reference genome for every family of fungi, the 1000 Fungal … unwrapping complex mechanisms of genome-wide regulation and cataloging them in JGI’s fungal portal MycoCosm. … The work …
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The Case for Conservation
… is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and female plants, … advances in sequencing technologies applied to the effort. The Impact Found on all continents, including … for Biotechnology, reported that high quality genome references are now available for male and female plants of …
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Forming Scientific Connections and Building Community
… experiences and what they’ll take with them as they go forward in their careers.   Listed below are the interns, … of Brachypodium distachyon root transporters in plant-microbiome interactions ” Cory-James Pugne-Andenoro : “The … “ Development of a multiplex genomic integration system for the selection of genes essential for specialized carbon …
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Corals in Hot Water Get Help From Their Microbes
… a photosynthetic microalgae, and a little-characterized microbiome. When warm waters stress corals, it might be …
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I-Min (Amy) Chen
… of the Object-Protocol Model (OPM) data management tools for scientific applications developed at Berkeley Lab. Dr. Chen is currently the Microbiome Computational Resource Lead at the JGI, responsible for the data management infrastructure of the Integrated …
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