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Training the Next Generation of Talent
New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of his … there was no mechanism for it,” he recalls. He arranged a meeting with the SNS dean, Juan Meza , who was very familiar …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… to the naked eye, microscopy reveals unexpected complexity At first glance, the slightly murky waters in the tube look … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Complex Systems (LRC) in Menlo Park, Calif. In the June 24, 2022, issue of the journal Science, Volland and colleagues, …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… more broadly, land plant evolution. Recent findings in Ceratopteris richardii show a long history of dynamic evolution … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … FT210100366, DE1401011143 to Z.-H.C.); the Horticulture Innovation Australia (grants LP18000, VG17003 to Z.-H.C.). …
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Genome sequence of the Trifolium rueppellianum - nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012
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Igor Grigoriev
Institute in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He … genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 … fungi.  Nature Microbiol. 8(4):596-610. Nelson et al (2022) Wildfire-dependent changes in soil microbiome …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge … information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub … stars in the Milky Way, viruses outnumber the microbes by at least another order of magnitude. For years, scientists …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome Institute, where he leads three … biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory … Biology JGI Co-chair, People Stewardship committee (2020-2022) UCLA Molecular Biology Institute Postdoctoral Award …
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Trent Northen
Dr. Northen is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic … with statistical significance. Nat Commun. 13, 2510 (2022). https://doi.org/10.1038/s41467-022-30118-9 Swift CL, …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … His responsibilities include the development of novel computational tools to identify virus sequences, the design of new … approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the …
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Hiroshi Otani
… and implementing new technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … and pangenomic analysis of the genus Streptomyces. Sci Rep. 2022 Nov 7;12(1):18909. Otani H, Mouncey NJ. RIViT-seq …
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