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… some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny … These organisms are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process … interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  …

… was green millet (Setaria viridis), a small model grass with a short lifecycle that uses a carbon fixation process … in Nature Biotechnology . Kellogg and her colleagues, along with researchers at the HudsonAlpha Institute for … thousands of years, farmers have selected for cereal plants without this shattering trait – referring to the moment when …

… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research … switchgrass transformation pipeline and, in collaboration with industrial partners, generated hundreds of transgenic … tolerance, and the mechanisms by which plants interact with their microbiomes. In addition, his group conducts …

… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His … approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the … of community-building efforts in the field of viral ecogenomics. For this role, Dr. Roux can rely on more than 10 …

… an interactive public database for the research community. With more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … experience in developing a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes …

… (Berkeley Lab). “We’re very excited to start working with this years’ crop of CSP recipients, over half of which … projects relevant to the DOE’s Office of Biological and Environmental Research (BER) missions in: sustainable … of emphasis: genes to function, plant and algal functional genomics, inter-organismal interactions, understanding …

… On February 8, 2024, the DOE Joint Genome Institute and the Environmental Molecular Sciences Laboratory hosted a webinar … The FICUS call allows researchers to combine the power of genomics and molecular characterization from the JGI and …  Who is eligible to submit a FICUS proposal? A:  We work with people from all around the world and at different …

… the crop for additional end products. The genetic diversity within this set of plants, each with a fully-sequenced … test what genes affect the plant’s adaptability to various environmental conditions. “To accelerate breeding for  … sites. “This paper is a combination of really cutting-edge genomics and genetic analysis with large scale data …

… lead on PNNL’s Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological … early career users on the UEC. As a user of the JGI and the Environmental Molecular Sciences Laboratory, another DOE … has served on review panels for the JGI’s Functional Genomics CSP and the JGI-EMSL FICUS programs and brings …

… supports that advance DOE Office of Science Biological and Environmental Research (BER) missions. The JGI provides … He studies fungal biodiversity, ecology, and evolution, with a focus on microbiome sciences and fungal symbioses. He … His current research focuses on the evolution, ecology, genomics and function of microbes and microbiomes, …

… outcomes of these infections can affect the interactions within their ecosystems. Summary Microbes drive the energy … Berkeley National Laboratory (Berkeley Lab), and the  Environmental Molecular Science Laboratory (EMSL), a DOE … Researchers have the opportunity to combine the power of genomics and molecular characterization offered at multiple …

… to enable great science that will help solve energy and environmental challenges. Viruses are everywhere — in soil, … the microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the … began to offer a window into viral existence. Along with highlighting the viruses in a given sample, …