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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, they …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… novel technique to access high-quality genomic information using minute quantities of DNA derived from individual … and uncultured in laboratories. Other firsts followed. The next year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a …
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Mindfully Moving JGI
… labs in one long building at Walnut Creek, after countless generations of sequencing platforms (up to 120 sequencing … at its peak, all the machines were switched off. Over the next two weeks, they were crated, shipped to, and then … cleanup.lbl.gov .     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI on the 2021 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … 21 fields appear on the list, and those from the JGI whose publications rank in the top 1% by citations for field and … team that combined field data with a reference switchgrass genome to associate climate adaptations with switchgrass …
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Functional Genomics of Novel Secondary Metabolites from Diverse Cyanobacteria Using Untargeted Metabolomics
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Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
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Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
This is where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … Transcriptional control of  Clostridium autoethanogenum  using CRISPRi ). Now, they’ll be able to further explore how …
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Size-fractionated metagenomic depth profiles from two sulfidic stations in the Chesapeake Bay.
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Drought shifts sorghum root metabolite and microbiome profiles and enriches for pipecolic acid
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Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing
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Structure determination of the HgcAB complex using metagenome sequence data: insights into microbial mercury methylation
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