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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science … to tease apart some of the mechanisms that regulate that response to drought through CAM.  ALISON: We’ll hear more …
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Boosting Small Molecule Production in Super “Soup”
… environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have both the machinery to make products such as proteins, and the mechanisms for maintenance to keep processes running smoothly. As reported August 26, … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Boosting Small Molecule Production in Super “Soup”
… engineered for the biochemical conversion of glucose to value-added products are limited in chemical output due to growth and viability constraints. Cell extracts provide … the source strains. (Blake Rasor) Think of cells as tiny factories: within their walls they have both the machinery to …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these advances. Over the last two … User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of … Microbial Genomes and Metagenomes Program since 2011. Prior to joining the DOE Joint Genome Institute, Dr. Kyrpides led … Integrated Genomics Inc. in Chicago, IL. He did his postdoctoral studies with Carl Woese at the University of Illinois …
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Virulence of banana wilt-causing fungal pathogen Fusarium oxysporum tropical race 4 is mediated by nitric oxide biosynthesis and accessory genes
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Genome Sequence of Victivallis vadensis ATCC BAA-548, an Anaerobic Bacterium from the Phylum Lentisphaerae, Isolated from the Human Gastrointestinal Tract
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to advance foundational science, creating opportunities for … (DOE) Joint Genome Institute (JGI) has released its newest 5-Year Strategic Plan: Innovating Genomics to Serve the …
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Leo Baumgart
… the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and microfluidics at the … operationalizing new genomic technologies, integrating automated liquid handling and bioinformatics pipelines to transition bench-scale methods into production workflows. …
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Dan Rokhsar
… joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three … Genome Project, Professor Dr. Rokhsar ’s team has continued to develop computational methods applicable to the diverse …
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Axel Visel
… Institute in Hanover, Germany, where he developed novel tools for large-scale in situ gene expression analysis in multicellular organisms. During his postdoctoral training at Lawrence Berkeley National Laboratory, he developed and applied novel computational and …
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Mike Sneddon
… annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for … and AI for large-scale genomics and lab informatics. Prior to joining JGI in late 2025, he served as Director of Scientific Computing at … platform. WO2021163637A1 , PCT application PCT/US2021/018050 (published 2021). Arkin, AP, et al. KBase: The United …
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