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… a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … to provide an improved eucalyptus genome assembly generated using advanced technologies to reconstruct the complete … were conducted by the JGI, along with genome assembly and annotation. Genome contiguity of the 2025 phased reference …

… Kaushal Sharma, one of five Antioch High School rising juniors who participated … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates … his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic locations and assign …

… before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. … to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the … whose signal would have been filtered out as noise using more traditional methods. Thus far 25 terabases of …

… to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … understand ecosystem-wide processes. Summary geNomad is an annotation and classification framework that combines and … currently has more than 700,000 plasmids from genomes, metagenomes and metatranscriptomes. To lower barriers to …

… Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire Editors Choice Award … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …

… Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and compute platforms and bioinformatics annotation pipelines that support JGI’s portals, tools, and … science.  Dr. Sneddon is an accomplished leader in data, software, compute, and AI for large-scale genomics and lab …

… For many scientists, the culmination of their work into a written report that is published in a … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … a gene sequence-based predictor of gene expression levels using machine learning tools. “This was very exciting to see …