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Multi‐season analysis reveals hundreds of drought‐responsive genes in sorghum
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PhycoCosm Tutorial
… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute …
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Transcriptional control of Clostridium autoethanogenum using CRISPRi
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TRIMER: Transcription Regulation Integrated with Metabolic Regulation
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Transcriptional Responses to Priority Effects in Nectar Yeast
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … a  few years ago, researchers can request quantitative SIP analysis as a capability in proposal calls to the U.S. … data reporting, improved collaboration, and more comparable analysis. A Data Standard for SIP  Recently, Purdue …
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Improving the Cacao Genome and Phytozome
… fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is collaborating … improved  T. cacao Matina 1-6 genome is now available for comparative purposes on the latest version of the JGI plant …
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A Community Resource for Secondary Metabolite Researchers
… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … growth and reproduction—most organisms produce a set of "secondary metabolites," chemical compounds that often … come pre-annotated using multiple commonly used sequence analysis tools is a means of expediting BGC and biosynthesis …
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Shared Genomic Regions Between Derivatives of a Large Segregating Population of Maize Identified Using Bulked Segregant Analysis Sequencing and Traditional Linkage Analysis
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Comparative genomics of the genus Desulfitobacterium
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 Annual Meeting . The meeting was a hybrid … Her lab has leveraged bioinformatics in computational analysis to identify and characterize TEs, developing … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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DNA affinity purification sequencing and transcriptional profiling reveal new aspects of nitrogen regulation in a filamentous fungus
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