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2024 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … our planet encode these functions in their genomes, and the JGI is uniquely positioned to combine sequencing, DNA …
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A Grass Model to Help Improve Giant Miscanthus
Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … is dormant during the winter and grows anew the following spring without requiring replanting.  Miscanthus is … amino acid asparagine – and remobilize this nitrogen in the spring so that the stems and leaves can grow without added …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Cultivating Symbiotic Antarctic Microbes
… and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … superphylum of extremophilic archaea first outlined by JGI scientists and their collaborators in 2013. While most … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, experimentally …
Learn more
A Grass Model to Help Improve Giant Miscanthus
Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … is dormant during the winter and grows anew the following spring without requiring replanting. Miscanthus is … amino acid asparagine – and remobilize this nitrogen in the spring so that the stems and leaves can grow without added …
Learn more
A Step Toward Controlling Soybean Rust
… to counter soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in 2010.       … The U.S. … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
Learn more
Gut Fungi: Unexpected Source of Novel Chemicals
… californiae , and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … National Laboratory. The team’s research at both the JGI and EMSL was enabled by the Facilities Integrating …
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Hiroshi Otani
… of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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Meeting Code of Conduct
All participants and staff of the JGI events are required to adhere to the following Code of …
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Trent Northen
… the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in the journal  Environmental Microbiome . “Before JGI was involved, I was not sure we could even complete a …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … involved in successfully biodegrading PCE.  Through the JGI’s  Community Science Program , they were able to analyze … data. (Data from the project are available on the  JGI Genome Portal .) The team has also been able to discover …
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