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Triggering Morel Fruiting
… from an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … fruiting bodies of morel in walk-in growth chambers in 1980s. Unfortunately, he died suddenly, and his patent has … China, and a wild black morel strain M. importuna CCBAS932 from the forests of France, were sequenced and annotated …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… to stress. The Impact Despite constituting less than 5% of land on Earth, peatlands store approximately one-third … peat from these boggy wetlands produces an estimated 5% of annual greenhouse gas emissions. Understanding how … as carbon sources. Summary Sphagnum, a genus of just under 400 mosses that can carry up to 25 times their dry weight in …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… The only requirements are that you stay under the 500-gigabase cap and that you don’t request outside of the … exploratory small proposal that might not max out the whole 500 gigabases? Is it better to try to reach that maximum …
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A Natural Mechanism Can Turbocharge Viral Evolution
… organism’s fitness. Moreover, the discovery of more than 30,000 DGRs in this analysis, a 20-fold increase over what was … the U.S. Department of Energy under contract no. DE-AC02-05CH11231. This research used resources of the National … Science Foundation’s XSEDE computing resource (award DEB170007), and through a Challenge Grant from the California …
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The JGI announces 2024 awardees for our Community Science Program annual call
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UC Merced Interns Reflect on Their JGI Summer Projects
… participated in this internship remotely due to COVID-19 restrictions, but virtual events and technology enabled a …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … require this kind of lab culture. Beginning in the early 2000s , these environmental metagenomes began to offer a … from different ecosystems all over the world, including 3,908 isolate reference DNA viruses and 264,413 …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… databases for homologous YcgR proteins and chose a set of 92 proteins for functional characterization as candidate biosensors. These 92 homologues were synthesized as codon optimized sequences … the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. This work was supported in part by NIH grants DP2 …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… Fresno (Fall 2018) Cristhian Gutierrez Huerta (2015 undergraduate intern): Just graduated from UC Merced and … in Faculty Training (UPLIFT) fellowship Sabah Ul-Hasan (2015 graduate intern): In her final year in the Quantitative & …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… gardens located in eight states spread across 1,100 miles. Switchgrass is a perennial grass that quickly … version of the genome is assembled into sequences of 5.5 million basepair (bp) in length, while the previous … southern locales did not survive the cold winter of 2019 at the most northern common garden in South Dakota. …
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Picking Up Threads of Cotton Genomics
… out of the green pods in every direction. There are 100 million families around the world whose livelihoods … production, and the crop’s annual economic impact of $500 billion worldwide underscores its value and importance … States, cotton production centers around two varieties: 95 percent of what is grown is known as Upland cotton ( …
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