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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of … terpenes play key roles in plant growth, defense, and environmental interactions. Terpenes are also economically important because of … carried out by EMBRAPA as part of the  Corymbia  genome project was supported by FAPDF grant “Nextree” …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake … the specialized software and supercomputers behind this project. But every part of this project depends on lakewater samples — so this episode is a …
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You Can Move, But You Can’t Hide
… and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found … called geNomad identifies and classifies MGEs based upon their gene content and their genetic sequences. The … the interactions that happen between tiny organisms (microbes) located in soils and water. MGEs like viruses and …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… Register here Book your stay at the conference venue This inaugural event will bring together … and applying laboratory ecosystems to help transition microbiome science from largely observational to reproducible mechanistic studies.  This conference …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) co-hosted a … call? A(nswer): We work with people from all around the world. We work with start-ups and mature companies, as long … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Improving the Cacao Genome and Phytozome
… brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global cocoa bean production … a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is collaborating with … Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the plant team …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Congratulations to Jane Grimwood, who has been appointed the … after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human … of Impact.     Notable large-scale multi-institutional JGI projects and resulting publications that Grimwood …
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Mining Metagenomes for Cas Proteins
… to accurately edit genomes (that is, repair gene mutations, and either delete or add genes in a precise fashion) … to be unearthed in sequencing and analyzing uncultivated microbes. Summary The CRISPR-Cas system is an immune … datasets from a wide variety of ecosystems around the world, conducting iterative searches using statistical …
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JGI announces 2024 Functional Genomics awardees
… year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic … Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and … in support of advancing the bioeconomy.  This year’s project goals range from improving crop productivity for …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual lifestyle; it can thrive in the soil as … soil mixture, publishing  the results in  Molecular Plant-Microbe Interactions . The results were striking. Adding …
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JGI announces 2025 Functional Genomics awardees
… Olufemi Isimikalu, Todd H. Oakley, BJ Philmus and Aaron M. Roshotte; [Below] Paul Scesa, Kathleen Scott, Tiffany … Through our  CSP Functional Genomics call , we look for projects that will leverage the JGI's DNA synthesis and … in support of advancing the bioeconomy. This year's project goals range from engineering drought-tolerant woody …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … green sharpshooter. In 2012, single cells isolated from the microbes found in the oil plume from Deepwater Horizon oil …
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