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New Microviridae isolated from Sulfitobacter reveals two cosmopolitan subfamilies of single-stranded DNA phages infecting marine and terrestrial Alphaproteobacteria
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is …
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Genome Sequence of Thermotoga sp. Strain RQ2, a Hyperthermophilic Bacterium Isolated from a Geothermally Heated Region of the Seafloor near Ribeira Quente, the Azores
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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Control of Drought Response in Sorghum (EPICON) is a five-year, multi-institution project funded by the DOE Office of … impact the crop and its microbiome. For three consecutive years (2016-2018), researchers conducted large-scale … each week over the full life cycle of the plant. The first year’s gene expression results were  published in the  …
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Ancient Algae Reveal Secrets of Plant Evolution
… that helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ … share key genes with land plants for making and modifying cell walls, a feature crucial for surviving on land. … the National Institutes of Health (NIH) awards (R21AI171952) and (R01GM140370) all to Y.Y., and by the German …
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Hiroshi Otani
… RiPP biosyntheses. J Ind Microbiol Biotechnol. 2023 Feb 17;50(1):kuad005. Otani H, Udwary DW, Mouncey NJ. … and pangenomic analysis of the genus Streptomyces. Sci Rep. 2022 Nov 7;12(1):18909. Otani H, Mouncey NJ. RIViT-seq … of regulons of transcriptional machineries. Nat Commun. 2022 Jun 17;13(1):3502. Udwary DW, Otani H, Mouncey NJ. New …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… For the last 15 years, Ray Turner has been one constant for the Joint Genome … Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has been one constant for the Joint Genome … 2008. Ray won the  Director’s Award for Operations in 2017 in recognition of his tireless efforts to ensure the …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… distinguish males and females even when plants with multi-year generation times are young and haven’t physically … National Key Research and Development Program of China (2017YFC0505203, 2016YFD0600101), and the National Key Project …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE … to easily analyze viral genomes. This includes (i) classifying viruses into groups that can be compared across … The work is supported by NIH Common Fund grant 1U24HL175772-01. This is not the first time Kyrpides and his …
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Steven Wilson
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