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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact … the fungal Tree of Life, including the 1000 Fungal Genomes Project, which aims to provide a reference genome for each …
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Natural soil microbiome variation affects spring foliar phenology with consequences for plant productivity and climate‐driven range shifts
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Frequently Asked Questions: Proposal Submission
… submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project types supported, sample/capacity limits, and … The CSP and FICUS calls are open to both domestic and international applicants from any institution type and at …
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Maureen Coleman and Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, … enzymes discovered in extreme environments to engineered microbiomes that accelerate biomass processing. This year’s portfolio also includes a project led by the National Ecological Observatory Network …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have … For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining … a fellow Berkeley professor from the De­partments of Earth and Planetary Science and Environmental Science, …
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Cultivating Symbiotic Antarctic Microbes
… cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple … microbiology and ‘omics techniques to experimentally determine that Nanohaloarchaeota are symbionts, rather than … the Archaea isolated from Deep Lake, the coldest place on Earth known to support life, and previously sequenced by the …
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