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Felipe Valdez-Nuñez  The JGI is eager to work and share our tools with a widening circle of researchers. That’s why …

Laboratory (Berkeley Lab). JGI is a DOE Office of Science user facility at Berkeley Lab.   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … please visit  energy.gov/science/office-science . … IMG/VR data portal …

The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each …

… ecosystem,” said Salamov, one of Wint’s mentors and a data scientist at the JGI. Previous studies were conducted … predictor of gene expression levels using machine learning tools. “This was very exciting to see how Rhondene not only … the research question and applied it to such a large data set, but also went all the way through to convert her …

Genomics (formerly DNA Synthesis) call, and he noted the data had driven his lab’s focus on guide RNA library generation and development and its … or through the  “Facilities Integrating Collaborations for User Science” (FICUS) initiative .  Q: What is the …

… and position JGI as a leading integrative genome science user facility. In addition to serving as JGI Director, Dr. … is also on the Leadership Team of the National Microbiome Data Collaborative and served as President of the Society … of solvent-producing Clostridium species. Scientific Data. 11 Hahnke, R. L. et al. 2022. Expanding the Genomic …

Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the … genome research and apply experimental and computation tools to solve research problems. In Visel’s group, Olmstead … says. “Many academic labs don’t know how to analyze RNA-Seq data very well, sending it out to companies. I’ll take that …

… the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome data … datasets from a variety of environments, as well as tools for analysis. “There is evidence that methanogenesis …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and his team at the JGI contributed … partners. Yet the team found none. Instead, the partners stubbornly maintained complete autonomy; they can be isolated … variation in its progeny. The study’s transcriptomic data also identified many genes potentially important for …

… an array of experiments at universities and national user facilities, researchers found that this protein detects … or DRI for short.  A kaleidoscope of structure-function data To study DRI experimentally, Blaby-Haas, Grosjean and … function inside the cell, Grosjean used the JGI-developed  guideRNA and Sequence Extraction Tool (gRNA-SeqRET) to …

Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

Nikos Kyrpides, Natalia Ivanova and Simon Roux, along with data from a consortium that included Susannah Tringe and … and Roux also worked together on the development of a new software tool called geNomad that identifies and classifies …