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… analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for … through implementation of advanced analysis pipelines and tools as well as development and implementation of …

… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science … Institute in Hanover, Germany, where he developed novel tools for large-scale in situ gene expression analysis in … for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic …

… and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions allows … program, these projects integrate cutting-edge genomic data with predictive modeling and bioengineering to advance …

… Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in environmental genomics by writing for the column Genome Watch in  Nature Reviews Microbiology .  The latest … metabolism . And postdoctoral researcher Sara Calhoun, data scientist Stephen Mondo, and  Fungal and Algal program …

… to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting … they reconstructed and examined over six hundred bacterial genomes — mainly actinobacteria, as well as proteobacteria, bacteroidata, and patescibacteria. A major strength of this kind of …

… crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … switchgrass genome sequence is available on the JGI plant data portal Phytozome. The combination of field data and genetic … Plant Dataset …

… research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to … training in human microbiome research at the Institute for Genome Sciences at the University of Maryland School of … She also leads the DOE’s multi-lab National Microbiome Data Collaborative (NMDC). Prospective users with questions …

… ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … has looked for DGRs in a broad range of publicly available datasets. They’ve discovered that DGRs are not only … level. Scientists might then harness them as molecular tools for research and industry applications. Summary In …

… describe their deep dives into genomics, computational tools, and big data.  …

… Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate and insightful …

… form of another species, so the scientists had to use the genome itself.   Approximately 67 million years ago, the ancestor to eelgrass underwent a whole genome duplication event, doubling all of its chromosomes.  … at a predictable rate, enabling researchers to use the genome assembly to calibrate their genetic clock.  Various …

… and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … find genetic regions of interest.” The combination of field data and genetic information has allowed the research team … puzzle with just 50 pieces. The combination of new genetic tools and experimental gardens allow researchers to detect …