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Kjiersten Fagnan
… computing consultant, after completing a petascale postdoctoral fellowship at NERSC and LBNL’s Computational Research … Extreme-Scale Computing Conference . … UC CORO participant, 2021 Member of the Networking and Information Technology …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the … offer host-engineering for our users,” says JGI Director Nigel Mouncey. Using CRAGE, JGI has established a portfolio of … bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural … regular schedule for a while. Moving forward, I’m hoping to get a new one out every two weeks. This time, we’ve got a …
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Ian Blaby
… design and assembly, strain engineering and bioinformatic tool development/data analysis for synthetic biology and functional … reveals the impact of hydrogen peroxide on protein stress responses and overlap with other stress transcriptomes. The …
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Len Pennacchio
… has focused on applying state-of-the-art molecular methods to address wide-ranging questions existing in biology. He … Joint Genome Institute, Senior Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. … Enhancers VISTA Cardiac Enhancer Browser ENCODE FaceBase … 2021-  NLM Board of Regents Working Group on “NIH …
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Frederik Schulz
Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses … Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine … and complex life. Science . 376: 1453-1458 Nayfach et al. (2021) A genomic catalog of Earth’s microbiomes. Nature …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … our little section on international genome miners, and today we have Francisco Barona-Goméz, or Paco, as he prefers … also talk about some of the great science that he does. So welcome to the show Paco Barona-Gomez from the Laboratorio …
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David Goodstein
… and computational surface physics, Dr. Goodstein held positions at Cornell, IBM, Utah State University, and semiconductor equipment manufacturer KLA-Tencor before joining the JGI … across multiple genomes.  eLife 11, e78526. Li et al., 2021.  Plant Pan-Genomics Comes of Age . Annual Review of …
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Massie S. Ballon
… the Communications and Outreach Manager at the JGI. Prior to this role, she served as the primary storyteller and social media manager for the JGI. She produced … Equity & Accountability (IDEA) Chairs Council.   … 2020-2021, UC Women’s Initiative (North Cohort) UC Managing …
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Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
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Complete Genome Sequence of Rahnella aquatilis CIP 78.65
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that … Executive Committee, on how that study went from the lab to the classroom. …
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