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A Step Toward Controlling Soybean Rust
… is the world’s leading soybean producer , and soybeans are used to produce biodiesel. The fungus  Phakopsora pachyrhizi causes Asian Soybean Rust (ASR) and is the major pathogen of … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Graduate Students Get Thesis Research Opportunity at the JGI
… at one of the DOE national laboratories or national user facilities. As a result of the latest call , a total of … how engineered environments contribute to greenhouse gases,” Kaze said. “It’s an exciting time in the field … in California’s Canal System,” she will work with Susannah Tringe, JGI’s User Programs deputy and head of the …
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JGI on the 2020 Highly Cited Researchers List
… Dan Rokhsar Simon Roux Asaf Salamov Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of … Chen ,  Natalia Ivanova ,  Nikos Kyrpides ,  Simon Roux , Susannah Tringe , and Tanja Woyke  were part of a “big data” … and genomic toolkit for the perennial grass  Miscanthus sinensis in  Nature Communications.  The reference genome …
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Webinar: Introducing the BioSANS capability
… instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations from: Scott Lea, EMSL’s … “Solar Energy Conversion in Cyanobacterial Membranes” Marcus Foston, Washington University in St. Louis on “Integrated … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA … requires ~ 1.5-10 ㎍. Low-input protocols are continuously improved, but currently require input in the ~ 30 – … depth required). Methylation detection currently only works using subread data, PacBio is working on support to use CCS …
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A User-Centered Approach to Accessing JGI Data
… plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a … the Data Portal reflects a structural shift in data access. Users were previously limited to accessing data sets within groups, such as … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Promoting the Power of Viral Metagenomics
… have been forced to confront the awesome power that viruses have to affect nearly every aspect of our daily lives.  But for researchers who study viruses that infect organisms much smaller than humans, like … at all.  In fact, even in non-pandemic times such viruses are well known to play major roles in a vast range of …
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Mapping the Earth’s Hidden Fungal Kingdom
… To put this evolutionary timescale in perspective, the genus Aspergillus has been evolving for 82 million years, making it nearly … ubiquity and ancient origins, fungi remain largely mysterious. Only about 200,000 fungal species have been named. Among … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… of California, Berkeley and Berkeley Lab, who discussed the exciting progress in gene editing made possible by … blooms and the alga-viral interactions within them; and Susan Wessler of UC Riverside, who discussed her work on transposable elements and how … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month … throughout April. This year, a new group at the Lab, the Sustainable Garden Club, hosted a DIY Succulent Workshop and … big goals with their everyday activities, striving for sustainability in lab spaces as well as offices. These …
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JGI announces first round of 2023 New Investigator awardees
… with DOE missions and from PIs who have not led any previously-accepted proposals —  through the  New Investigator … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of … to the worldwide scientific community through its  User Programs on a competitive, peer-reviewed basis. … True to the introduction, Hungate spoke with real enthusiasm, even delight. He qualified his talk title as he took …
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