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Improving the Cacao Genome and Phytozome
… annotation was developing a high quality node for cacao used for systemic orthology to enable use for both cacao functional biology and breeding.     … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… of California, Berkeley and Berkeley Lab, who discussed the exciting progress in gene editing made possible by … lot of unlocked questions to answer,” she said. Learn more about Doudna and her latest work at the  Innovative Genomics … can really change large-scale processes.” To learn more about Assaf Vardi’s work, find the  Vardi Lab website , and …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual …
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2025 Progress Report
… how their laboratory and data science efforts support users, advance foundational science and enable biotechnology … Mission  As a U.S. Department of Energy Office of Science user facility supported by the Biological and Environmental …
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A User-Centered Approach to Accessing JGI Data
… plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a … the Data Portal reflects a structural shift in data access. Users were previously limited to accessing data sets within … current Data Restriction Policy requires that users know about the FY Funding Year, and the publication status in …
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Green Algae Reveal One mRNA Encodes Many Proteins
… Academy of Sciences , a team of researchers has found numerous examples of polycistronic expression – in which two or … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab and the Environmental … Sciences Laboratory (EMSL), a DOE Office of Science user facility. The work was partly enabled by the …
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Better Genome Editing for Bioenergy
… of the genes in a lipid-prolific yeast. The Impact The team used this set of guide RNAs on  Yarrowia lipolytica to … furthers the U.S. Department of Energy’s goal of producing sustainable fuels from alternative sources. Moreover, the team says the approach they used to validate their set of guide RNAs could be applied to …
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A One-Stop Shop for Analyzing Algal Genomes
… an interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, … genetic underpinnings responsible for these traits takes us closer to harnessing algae for bioenergy and the greater … genomic data on algae into one place, PhycoCosm allows users to easily compile data that answers what genes are …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… are solicited annually for the summer term (May through August) and selected projects will receive stipend and travel …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its … evolved from a parasitic interaction with their soil fungus host, Rhizopus microsporus . Researchers found that … and a part of the oil-producing Mucoromycotina group, about which little is known. The Cornell team cultivated and …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … reference sequence of the complex switchgrass  genome using samples collected at these gardens. Building off this …
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JGI@25: Using Team Science to Build Communities Around Data
… Spatafora and Jason Stajich from UC Riverside would focus on broad sampling of early diverging fungi, and Francis … National Institute for Agricultural Research (INRAE) focused on in-depth exploration of ecology-related groups of … genomes in progress and 200 that are pending samples from users. Roughly 300 have been published. Spatafora said the …
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