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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … information as well as of important descriptive metadata about each strain. “This has been a very fruitful …
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Pinning Down a Piece of Photosynthesis
… an array of experiments at universities and national user facilities, researchers found that this protein detects … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … we were able to work with on this project to ask questions about structure and function,” Blaby-Haas said.  Looking at …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through … data policies. Since completion of the HGP, the JGI has sustained its commitment to uploading sequence data generated … other users. After the RFI closes on April 21, the JGI will review the solicited feedback to consider policy changes in …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … genes from isolates, there isn’t much scientists can tell about its function or its origin. As a result, these genes …
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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… Setsuko Wakao, Meng Wang, and Allison Werner.   A total of 20 proposals were selected by the Joint Genome Institute (JGI) and the Molecular Foundry (TMF) for their collaborative user program. The portfolio of research proposals integrates …
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Fishing for Novel Cellulose Degraders
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and unknown. The challenge remains to learn more about what microbes are present in any given … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No. …
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Frederik Schulz
… Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the …
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Gene Expression: From On-Off Switch to Dial
… approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of … systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. Summary Life is all about balance. This study,  recently published in the  …
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … of the genes in a lipid-prolific yeast. The Impact The team used this set of guide RNAs on  Yarrowia lipolytica to … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica …
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Charting Progress toward Professional Goals
… on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help … programs – some managed by the Lab – to learn more about their experiences. Jehan Jacobs participated in the … it? Jehan Jacobs : I have a poster session actually, like just a couple days from now. So I've been thinking about …
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Trent Northen
… leadership roles within large DOE-funded research programs using mass spectrometry for energy and environmental … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the …
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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are … including single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics …
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