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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes … in Mycology . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved …
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JGI Workshops at PAG
… the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, … field and bring it to the attention of the wider genomics community. Jan. 13 workshop: BER Plant Genomic Science In … biology and hear from researchers who are applying genomic sequence information to BER funded activities of plant …
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A Collaboration to Improve Plant Genome Annotations Across Species
… the project. The story is reposted here in modified format; their conversation has been lightly edited and condensed … Schmutz is the Plant Program Lead at the JGI. Sarah:  Why is a resource like this important to the field of plant … We looked at the plant’s response in the aboveground and root tissues. The striking thing we found was related to …
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Host-specific and tissue-dependent orchestration of microbiome community structure in traditional rice paddy ecosystems
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Unusual Metabolism and Hypervariation in the Genome of a Gracilibacterium (BD1-5) from an Oil-Degrading Community
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Seasonal fluctuations in ionic concentrations drive microbial succession in a hypersaline lake community
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A metagenomic insight into freshwater methane-utilizing communities and evidence for cooperation between the Methylococcaceae and the Methylophilaceae
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Marine microbial community responses related to wetland carbon mobilization in the coastal zone
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Assembly and Succession of Iron Oxide Microbial Mat Communities in Acidic Geothermal Springs
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High-Throughput Metagenomic Technologies for Complex Microbial Community Analysis: Open and Closed Formats
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Metatranscriptomic analysis of lignocellulolytic microbial communities involved in high-solids decomposition of rice straw
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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