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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… invited speakers shared how research infrastructure – DNA sequencing, synthesis, metabolomics, data analysis, and new … more interested in microbes with the potential to impact global climate change, he said. “To understand the … talk,” she concluded, “is that as we leverage these amazing technologies that the JGI has to identify and sequence who’s …
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Multiplex Editing of the Nucleoredoxin1 Tandem Array in Poplar: From Small Indels to Translocations and Complex Inversions
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Soil virus offers insight into maintaining microorganisms
… portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative effort, … study in  Nature Communications , a chitosanase, is tied to carbon cycling and plays an important role in how carbon is … AMGs in soil viruses thought to break down chitin, the gene sequences were cloned by the JGI.  The JGI’s DNA synthesis …
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Natural Prodcast Episode 19: Bill Fenical
… forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …
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JGI@25: Strengthening Soybean
… first legume species with a published complete draft genome sequence. At the time, the vital global source of both protein and oil was also the largest … rediscovering genetics, with the evolution of sequencing technologies and the evolution of bioinformatics.”  P. …
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A Plant Root Atlas for Tracking Developmental Trajectories
… is also focused on single-cell and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel … plant and fungal single-cell and spatial transcriptomic technologies, as described in the JGI Strategic Plan. The … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science Program of the … initiatives in bioenergy crop improvement and terrestrial carbon transformations.” The JGI’s large-scale call included … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less … symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver water and nutrients. In order to … to study both sides of this interaction up close, using RNA sequencing to understand gene expression: one of the first …
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Pinning Down a Piece of Photosynthesis
… new insights into how these ocean photosynthesizers cycle carbon in changing conditions. The products of … the air we breathe and the fuel for food webs as they turn carbon dioxide and water into oxygen and sugars. How … of that machine — photosynthesizers’ DNA and RNA. These sequences provide a list of machine parts, and an idea of …
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Integrating Experimentation with Data
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Matt Blow
… scientist on projects to develop functional genomic technologies and to understand genome function in bacteria. … In Vivo Enhancers. Science 3426157. Blow et al 2010. ChIP-Seq identification of weakly conserved heart enhancers. Nat …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … with DOE mission-relevant projects that call for expansive sequencing, synthetic biology, and metabolomics capabilities … Letters of Intent. Proposals may include synthetic biology, sequencing, and metabolomics. Proposals may include …
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