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JGI on the 2020 Highly Cited Researchers List
… fields over the last decade, demonstrated by the production of multiple highly-cited papers that rank in the top 1% by citations for field and year in the Web of Science.” Less than 6,200 researchers working in 21 … to identify a gene related to seed dispersal in wild populations for the first time. I-Min Chen ,  Natalia …
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Genomic variation and biogeography of Antarctic haloarchaea
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Webinar: MycoCosm Tutorial
… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … While are still working on finalizing the tree and related publication the tree is still in development and not … search for genes/proteins by their commonly used names in publications? e.g. erg-1 (instead of the Gene ID etc., which …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … Shiitake mushrooms get their name from the same place they often source their nutrients — the shii tree, a Japanese … genetic diversity between cultivated and wild shiitake populations. The Impact Lentinula mushrooms are white rot …
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Mapping Heat Resistance in Yeasts
… annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new … The Impact One of the challenges in understanding wild populations is that tests to find associations between … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and lay a future-ready foundation     Over … timescale in perspective, the genus Aspergillus has been evolving for 82 million years, making it nearly 30 times … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations …
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Genetic Architecture of Flowering-Time Variation in Brachypodium distachyon  
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Major impacts of widespread structural variation on sorghum.
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … has a rich back story — they rely on enzymes that have been evolving for billions of years. However, these enzymes are often loosely …
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Fungal Friends or Foes in Plant Roots
… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … friends or foes. The Impact Microbial communities comprised of fungi and bacteria can thrive in plant roots. They play … consisting of fungal species from natural Arabidopsis populations around Europe. The JGI sequenced and annotated …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … bioremediate toxic substances has led to the development of cost-effective environmental cleanup strategies. Summary … of Española, the Santa Clara Pueblo and its nearby rural populations rely heavily on groundwater as their only source …
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A Community Resource for Secondary Metabolite Researchers
… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … growth and reproduction—most organisms produce a set of "secondary metabolites," chemical compounds that often … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …
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