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Selection to sequence: opportunities in fungal genomics
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Frameshift detection in prokaryotic genomic sequences.
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Draft Genome Sequences of Switchgrass Diazotrophs
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Fishing for Novel Cellulose Degraders
… genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a … approach to isolate cellulose-degrading microbes. They first bound single microbes to fluorescently labeled … pools, followed by whole genome amplification and shotgun sequencing. The team first tested the approach on bacterial …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
For the first time, a team has comprehensively described host-virus … a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … Cone Pool in Mono County, California, scientists have used sequencing methods for the first time to comprehensively …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, more … (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … story of the blind men who encounter an elephant for the first time. Based on the single body part each blind man …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the JGI synthesis grant during a … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the … availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this polar … over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  Microbiome shows …
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The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
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Three Join the JGI User Executive Committee
… three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of Oak Ridge National Laboratory and Elizabeth “Lizzy” … in metagenomics and novel applications for long-read DNA sequencing. As a UEC member, Wilbanks will advocate for …
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Complete genome sequence of Halorhodospira halophila SL1
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Genome Project Standards in a New Era of Sequencing
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