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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent of …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …
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Phylogenomic insights into the taxonomy, ecology, and mating systems of the lorchel family Discinaceae (Pezizales, Ascomycota)
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Jeremy Schmutz
Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for … human chromosomes 5, 16, and 19. Following the completion of the human genome project in 2003, he developed … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …
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The Genome Portal of the Department of Energy Joint Genome Institute
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The Phaeodactylum genome reveals the evolutionary history of diatom genomes
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral … at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …
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Cultivating Symbiotic Antarctic Microbes
The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … Aenigmarchaeota, Nanoarchaeota, and Nanohaloarchaea) superphylum of extremophilic archaea first outlined by JGI …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … was able to identify enzymes in the soil and who made them. Based on data reported in the April issue of Soil Biology …
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Effects of sample treatments on genome recovery via single-cell genomics
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in …
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