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JGI on the 2021 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … 21 fields appear on the list, and those from the JGI whose publications rank in the top 1% by citations for field and …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … and annotations for 35 species representing all major evolutionary lineages in the land plant tree of life.   As … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Cultivating Symbiotic Antarctic Microbes
… symbionts, rather than free-living organisms as had been originally thought. The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … analyses. The species harbors genes encoding SPEARE proteins—which contain  s erine  p roteas e ,  a dhesion …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … University in British Columbia, Canada. This is the last of the podcasts we recorded in my hotel room at SIMB, or the … into natural products in the first place? ROGER:  So I was originally trained in the UK, I did my undergraduate degree …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … For a virus with a “head-tail” morphology, this means using proteins on its tail fibers to latch onto a specific target … cell’s membrane. Two decades ago, a team discovered a group of viruses that had in their genomes a surprising tool: a …
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Soil virus offers insight into maintaining microorganisms
… The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome … These viral chitosanases were distinct from similar proteins found in archaea, fungi or bacteria. Certain … counterparts suggest the viral versions of the chitosanases originated in bacteria before being modified into …
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Tomas Tyml
… microbial eukaryotes. He hopes to broaden our understanding of the roles these associations play in the evolutionary history of life. …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 … application while also encouraging data users to cite the original data source. Differences between JGI’s and NCBI’s …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play … time, they noted that the F. cylindrus genome encoded more proteins requiring zinc than non-polar algae. They …
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Gut Fungi: Unexpected Source of Novel Chemicals
… The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest their last leafy meal. In their evolutionary history, these fungi branched off early from … that these expressed genes translated into expected proteins. That work was done in collaboration with the …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that there is a striking division … team was investigating. So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) and …
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … goal has been for all this new cotton work, and even the original cotton project was to try to bring in molecular … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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