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Characterization of switchgrass (Panicum virgatum L.) PvKSL1 as a levopimaradiene/abietadiene‐type diterpene synthase
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A survey of computational approaches for characterizing microbial interactions in microbial mats
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Characterisation and comparative analysis of mitochondrial genomes of false, yellow, black and blushing morels provide insights on their structure and evolution
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Introducing New Members of the JGI User Executive Committee
… JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell … “you-wren”) of the University of Arizona! They join nine other JGI users already serving on the UEC – go here … JGI research priorities.” U’Ren, who studies ecological and evolutionary factors shaping the assembly of fungal …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … genome discoveries. Unlocking the intricate details of life’s genetic blueprint has long been a significant … also utilized large-scale metagenomic assemblies from three terabase-scale (Tb) coassemblies that explore diverse …
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An Integrated Dataset to Understand Ecosystem Interaction
… yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their … data set will help identify how different elements of the ecosystem interact and respond to changes in the … in size. Resources for genomic sequencing, analysis and characterization were provided by the U.S. Department of …
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A User-Centered Approach to Accessing JGI Data
… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data … common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have … as the Sainsbury Institute, by annotating not just one but three genomes for P. pachyrhizi , which are available on MycoCosm … Glycine max on Phytozome … 3 P. pachyrhizi genomes on MycoCosm …
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SPRUCE-ing Up Science
… his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. … was just beginning to develop and expand into the world of evolutionary biology. And around that time, a collaborative … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … workflows that allow researchers to easily analyze viral genomes. This includes (i) classifying viruses into groups …
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A multi-omic characterization of temperature stress in a halotolerant Scenedesmus strain for algal biotechnology
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Molecular characterization of L-413C, a P2-related plague diagnostic bacteriophage
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