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Natural Prodcast Episode 22: Alison Narayan
… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … about making them. So I really came at it not necessarily based on the biology really just from as a simple organic …
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High Throughput Phosphoglycolate Phosphatase Activity Assay Using Crude Leaf Extract and Recombinant Enzyme to Determine Kinetic Parameters Km and Vmax Using a Microplate Reader
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JGI on the 2021 Highly Cited Researchers List
… JGI! They are among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” …
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The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
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Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters
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Igor Grigoriev
… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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The Expanding Universe of Methane Metabolisms in Archaea
… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta … abundant populations detected in the Washburn sediments and based on metabolic reconstructions, the team has two main …
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Informatics Advisory Committee
… The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The … on the effective management and strategic objectives for the JGI’s data science, informatics and information …
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Computationally Classifying Fungal Lifestyles
… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the … between fungal lifestyles of saprobes and pathogens based on the data provided. In this proof of concept test, …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the bench to … Hour mentioned that she had gained knowledge in bioinformatics and machine learning. “Also,” she added, ”I’ve … Bushnell Project:  Machine Learning Applications in Gene Annotation Masato Terasaki Mentor: Yumary Vasquez Project:  …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … nitrous oxide). Summary To do this work, the international scientific team led by Petr Baldrian of the Czech Academy of …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 Annual … at the JGI’s history, from its beginnings in the sequencing for the Human Genome Project out to the future of the … and Environmental Research “There are two kinds of scientific revolutions,” Ari Patrinos opened with this quote …
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