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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role … carried out postdoctoral work at LBNL, where he worked on computational and experimental approaches to study genome regulation in human and other … BS in Biochemistry and Biological Chemistry, Nottingham University, UK PhD in …
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Virus Discoveries that Keep Getting Bigger
… to single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last thirty … hosts. Lately, researchers have used culture-independent approaches to gain insight into the  genomes of giant … on giant virus diversity, and how sequencing and bioinformatics have sped up the study of giant viruses. The …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 … to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species …
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Silver age of GOLD introduces new features
… OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 … making curated microbiome metadata that follows community standards freely available, and enabling large-scale … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … States. They also provided multiple access points to the information. The team harnessed a community-science program to collect samples from across the country to standardize the process. They noted this may be the first …
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Strategic Integration of Multiple Bioinformatics Resources for System Level Analysis of Biological Networks
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Simple and Rapid Site-Specific Integration of Multiple Heterologous DNAs into the Escherichia coli Chromosome
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Integrating chromatin conformation information in a self-supervised learning model improves metagenome binning
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and … perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … This work was supported by the Energy Biosciences Institute and the DOE Center for Advanced Bioenergy and Bioproducts …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team … Berkeley National Laboratory. Mike earned his PhD in Computational Biology and Bioinformatics from Yale … Liu, O., Akiva, E., Eyles, T. H., Galm, U., Ganesh, S., Hendrix, S. L. B., Hwang, W. W., Kim, J. H., …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last …
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Axel Visel
… the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. … National Laboratory, he developed and applied novel computational and experimental sequence-based methods for …
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