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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … in the environment — their sheer genetic diversity. As pioneers of this field, the JGI has leveraged metagenomics to …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… have made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial … ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … can be used to create compounds more efficiently than one strain could on its own.  In work published in  …
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Crops as Tough as World Cup Turf
… other crops to grow well in worse conditions: with more heat, less water and less fertilizer. Grasses do better in these … traits that could transfer from grasses into other crops.  One grass they studied just happened to be the same species …
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The JGI Data Portal: Improving User Experience
The human-centered, agile collaboration between the JGI and the information technology company … from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a … data more findable and easier to download is a complex one, so our joint team started small, in the tradition of …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … it to usable organic compounds. However, no microbe works alone. Archaea, bacteria, and viruses all operate in concert … genomes. One of these systems, the CRISPR-Cas9 system, is a powerful tool in gene editing, but many other systems exist. …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … there.  A  Communications Biology article highlights how one microalga collected from water on the ice surface … lives in a range of habitats — from brine pockets and melt pools, and within the water column. They are also the …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable … scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s … Copies are available online – click here to go download one from the archive of JGI Progress Reports. Print copies …
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New Research Sheds Light on Diversity in the Deep Sea
… vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too deep in … get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … five oceanic regions. In doing so, they found a high degree of variability in the types of microorganisms that inhabit …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … of data produced at the facility, provided this is done in a timely fashion. The publications resulting from …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
UC Merced students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was preceded by short final presentations attended by … and graduate students from UC Merced with at least one JGI mentor. Together, they work through a specific …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … call included algal genomics as a focus area, and one of the accepted proposals came from Chris Bowler of …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint … (JGI) and University of California (UC), Merced. What started with 2 interns in the summer of 2014 has grown to … campuses with this being our largest and most successful one. It’s proven to be a really good model for us that we …
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